Apple Cider Whoopie Pie Cookies with Caramel Filling Recipe
Sink into bliss with Apple Cider Whoopie Pie Cookies with Caramel Filling, an irresistibly soft, spiced treat with pillowy cookies and a dreamy caramel filling. Each bite captures the coziness of autumn, the aroma of warm cider, and the playful charm of classic whoopie pies, making these the perfect sweet ending to any gathering or a cozy night in with a mug of something warm. This recipe brings together simple ingredients to create a truly memorable and comforting dessert that’s always met with delighted smiles.

Ingredients You’ll Need
Gathering your ingredients is a breeze here—every element pulls its weight, bringing moist texture, orchard-fresh apple flavor, and that familiar caramel sweetness. The spices add warmth, the cider keeps things tender, and the filling turns these cookies into something truly special.
- All-purpose flour: The sturdy base that ensures your cookies bake up soft, not crumbly.
- Baking soda: Gives your cookies that perfect lift for a cake-like bite.
- Ground cinnamon: Adds welcome warmth and brings out the apple flavor.
- Ground nutmeg: A dash of this lifts the spice profile just enough to evoke autumn.
- Salt: Brightens all the sweet flavors and keeps them from tasting flat.
- Unsalted butter (softened): Provides rich flavor and a tender crumb in both the cookies and the filling.
- Granulated sugar: Sweetens the cookies and helps with browning.
- Large egg: Adds structure and a bit of extra richness.
- Vanilla extract: Rounds out both cookie and filling with a comforting, creamy flavor.
- Apple cider: The star flavor—use fresh cider for the best results!
- Milk: Keeps the dough soft and lends a little extra tenderness.
- Powdered sugar: The secret to a fluffy, smooth caramel filling.
- Caramel sauce: Use your favorite store-bought or homemade for irresistible flavor.
How to Make Apple Cider Whoopie Pie Cookies with Caramel Filling
Step 1: Sift and Combine Your Dry Ingredients
Start by combining your flour, baking soda, cinnamon, nutmeg, and salt in a medium bowl. Whisking keeps everything light and ensures the spices are evenly distributed throughout. This step really guarantees every cookie tastes rich and warmly spiced.
Step 2: Cream Butter and Sugar
In a large mixing bowl, beat the softened butter with the granulated sugar until it’s pale and fluffy. This is where you’re building the airiness that makes these cookies so tender and soft.
Step 3: Add Eggs and Vanilla
Next, beat in the egg and vanilla extract until everything is perfectly blended. These ingredients bring the batter together and infuse it with that mellow, comforting vanilla aroma.
Step 4: Mix Wet and Dry Ingredients with Apple Cider and Milk
Now, alternate adding your dry mixture to the wet, switching off with splashes of apple cider and milk. Mixing this way helps the batter stay smooth and evenly hydrated, with the cider imparting a subtle tang and all that signature apple flavor.
Step 5: Portion and Bake
Using a tablespoon, drop rounds of batter onto your prepared baking sheets, giving them space to puff up in the oven. Bake at 350°F for about 10 to 12 minutes, or until the edges just turn golden. The kitchen will fill with the most incredible cinnamon-apple aroma!
Step 6: Cool Your Cookies Completely
Once baked, let the cookies cool on a wire rack. Patience here pays off; you want them completely cool before sandwiching with caramel, or the filling will melt and escape.
Step 7: Make the Caramel Filling
Beat the softened butter until creamy, then gradually add the powdered sugar. Pour in caramel sauce, vanilla, and a pinch of salt, and whip until you have a cloud-like, smooth, and glossy filling.
Step 8: Assemble the Whoopie Pies
Spread or pipe a generous layer of caramel filling onto the flat side of half the cookies. Top with their partners, gently pressing to make heavenly Apple Cider Whoopie Pie Cookies with Caramel Filling sandwiches.
How to Serve Apple Cider Whoopie Pie Cookies with Caramel Filling

Garnishes
A light dusting of powdered sugar looks beautiful and gives your Apple Cider Whoopie Pie Cookies with Caramel Filling a snowy, festive touch. For extra flair, drizzle a little more caramel sauce across the tops right before serving—pure decadence! If you’re feeling really adventurous, a sprinkle of flaky sea salt adds a sophisticated finish.
Side Dishes
Pair these cookies with sips of warm apple cider, a mug of chai, or spiced black tea for a cozy autumn treat. For gatherings, arrange them alongside a platter of crisp apple slices, candied pecans, or even soft cheddar—these all complement the flavors in the cookies beautifully.
Creative Ways to Present
Stack the whoopie pies high on a rustic cake plate and adorn with fresh apple slices or mini cinnamon sticks for an inviting dessert table centerpiece. For a party, wrap each cookie sandwich in parchment and tie with twine—your guests will love the personal touch! And for holiday gifting, they look darling tucked into a bakery box lined with festive tissue.
Make Ahead and Storage
Storing Leftovers
Your assembled Apple Cider Whoopie Pie Cookies with Caramel Filling can be stored in an airtight container at room temperature for a day, but I recommend keeping them in the refrigerator if you plan to enjoy them longer. The cookies stay moist and the caramel keeps its creamy texture for up to four days—if they last that long!
Freezing
These whoopie pies freeze beautifully. Place them in a single layer on a baking sheet, freeze until solid, then transfer to a freezer-safe container or bag. Defrost in the fridge or at room temperature for a ready-made autumn treat any time—just wait to dust with powdered sugar until after thawing for best results.
Reheating
They’re delicious straight from the fridge, but if you like your Apple Cider Whoopie Pie Cookies with Caramel Filling on the softer side, let them sit at room temperature for 10-15 minutes. Avoid microwaving—gentle warming ensures the filling stays fluffy and the cookies hold their shape.
FAQs
Can I use store-bought caramel sauce for the filling?
Absolutely! Store-bought caramel sauce works perfectly, just make sure it’s a nice, thick variety so your filling holds up. If you have homemade caramel, that’s even better—just cool it fully before adding to the buttery base.
What’s the best apple cider to use in the cookies?
Fresh, unfiltered apple cider from your local market or orchard will provide the richest, most authentic flavor. If you can only find shelf-stable apple cider, it will still taste delicious—just double-check it’s straight cider, not apple juice or a blend.
Can I make the cookie dough ahead of time?
Yes! You can prep the dough and store it in the fridge for up to 24 hours before baking. For the freshest cookies, bake them off right before you plan to assemble and serve the Apple Cider Whoopie Pie Cookies with Caramel Filling.
How can I tell when the cookies are done baking?
The edges will look just set and very lightly golden, but the centers will still feel soft. They firm up as they cool, so resist the urge to overbake—you want a pillowy, moist cookie that pairs perfectly with the caramel filling.
Can I make these gluten-free?
Definitely! Swap in your favorite 1-to-1 gluten-free flour blend for the all-purpose flour. Be sure the blend contains xanthan gum for the right texture, and check that your caramel sauce is gluten-free if you’re buying it pre-made.
Final Thoughts
There’s nothing quite like the magic of sharing Apple Cider Whoopie Pie Cookies with Caramel Filling, whether you’re baking them for a fall celebration or just to treat yourself. I promise: every bite is a soft, spiced, and caramel-kissed delight. Give these a try—you’ll want to make them part of your cozy-weather baking tradition!